STRINGSTRING
Cin.44670 protein (Ciona intestinalis) - STRING interaction network
"Cin.44670" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.44670Uncharacterized protein (191 aa)    
Predicted Functional Partners:
mthfr
Methylenetetrahydrofolate reductase (650 aa)
   
 
  0.703
ENSCING00000005921
Uncharacterized protein (999 aa)
   
 
  0.676
ENSCING00000023410
Uncharacterized protein (1269 aa)
 
0.642
ENSCING00000002929
Uncharacterized protein (934 aa)
       
  0.620
ENSCING00000018207
Uncharacterized protein (119 aa)
   
 
  0.550
ENSCING00000014315
Uncharacterized protein (211 aa)
   
 
  0.550
ENSCING00000002850
Uncharacterized protein (2241 aa)
         
  0.524
ENSCING00000008174
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (400 aa)
   
 
  0.503
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.497
ENSCING00000002710
Nitric oxide synthase ; Produces nitric oxide (NO) (1127 aa)
     
  0.491
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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