LOC778840 protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC778840

WD_REPEATS_REGION domain-containing protein. (661 aa)

Predicted Functional Partners:

Ic1

0.796

LOC100177874

0.788

ci-rsp4/6

0.750

ciic3

0.729

F6UZT3_CIOIN

0.688

F6XKS1_CIOIN

0.683

Rbdlc

0.672

H2XPC8_CIOIN

0.670

LOC100184836

0.669

F6PHB9_CIOIN

0.669

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PHB9_CIOIN	F6UZT3_CIOIN	ENSCINP00000018292	ENSCINP00000014285	Uncharacterized protein.	Uncharacterized protein.	0.542
F6PHB9_CIOIN	F6XKS1_CIOIN	ENSCINP00000018292	ENSCINP00000007038	Uncharacterized protein.	Uncharacterized protein.	0.542
F6PHB9_CIOIN	H2XPC8_CIOIN	ENSCINP00000018292	ENSCINP00000031511	Uncharacterized protein.	Uncharacterized protein.	0.548
F6PHB9_CIOIN	Ic1	ENSCINP00000018292	ENSCINP00000014437	Uncharacterized protein.	Uncharacterized protein.	0.644
F6PHB9_CIOIN	LOC100177874	ENSCINP00000018292	ENSCINP00000036262	Uncharacterized protein.	Dynein regulatory complex subunit 2 isoform X2.	0.418
F6PHB9_CIOIN	LOC100184836	ENSCINP00000018292	ENSCINP00000008812	Uncharacterized protein.	Uncharacterized protein.	0.548
F6PHB9_CIOIN	LOC778840	ENSCINP00000018292	ENSCINP00000017986	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.669
F6PHB9_CIOIN	Rbdlc	ENSCINP00000018292	ENSCINP00000031790	Uncharacterized protein.	Dynein light chain roadblock.	0.401
F6UZT3_CIOIN	F6PHB9_CIOIN	ENSCINP00000014285	ENSCINP00000018292	Uncharacterized protein.	Uncharacterized protein.	0.542
F6UZT3_CIOIN	F6XKS1_CIOIN	ENSCINP00000014285	ENSCINP00000007038	Uncharacterized protein.	Uncharacterized protein.	0.970
F6UZT3_CIOIN	H2XPC8_CIOIN	ENSCINP00000014285	ENSCINP00000031511	Uncharacterized protein.	Uncharacterized protein.	0.542
F6UZT3_CIOIN	Ic1	ENSCINP00000014285	ENSCINP00000014437	Uncharacterized protein.	Uncharacterized protein.	0.638
F6UZT3_CIOIN	LOC100177874	ENSCINP00000014285	ENSCINP00000036262	Uncharacterized protein.	Dynein regulatory complex subunit 2 isoform X2.	0.432
F6UZT3_CIOIN	LOC100184836	ENSCINP00000014285	ENSCINP00000008812	Uncharacterized protein.	Uncharacterized protein.	0.542
F6UZT3_CIOIN	LOC778840	ENSCINP00000014285	ENSCINP00000017986	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.688
F6XKS1_CIOIN	F6PHB9_CIOIN	ENSCINP00000007038	ENSCINP00000018292	Uncharacterized protein.	Uncharacterized protein.	0.542
F6XKS1_CIOIN	F6UZT3_CIOIN	ENSCINP00000007038	ENSCINP00000014285	Uncharacterized protein.	Uncharacterized protein.	0.970
F6XKS1_CIOIN	H2XPC8_CIOIN	ENSCINP00000007038	ENSCINP00000031511	Uncharacterized protein.	Uncharacterized protein.	0.542
F6XKS1_CIOIN	Ic1	ENSCINP00000007038	ENSCINP00000014437	Uncharacterized protein.	Uncharacterized protein.	0.632
F6XKS1_CIOIN	LOC100177874	ENSCINP00000007038	ENSCINP00000036262	Uncharacterized protein.	Dynein regulatory complex subunit 2 isoform X2.	0.430