STRINGSTRING
ic2 protein (Ciona intestinalis) - STRING interaction network
"ic2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ic2Uncharacterized protein (661 aa)    
Predicted Functional Partners:
ciaxp66.0
Axonemal p66.0 (575 aa)
     
 
  0.747
ic5
DC2-related axonemal dynein intermediate chain 5 (548 aa)
     
 
  0.747
ENSCING00000022961
Uncharacterized protein (257 aa)
     
 
  0.722
ciic3
Thioredoxin domain-containing protein 3 homolog ; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity) (653 aa)
     
 
  0.681
rbdlc
Roadblock-related dynein light chain (96 aa)
     
 
  0.640
dnal1
Dynein light chain 1, axonemal (190 aa)
     
 
  0.630
dynll6
Dynein light chain 6 (89 aa)
     
 
  0.629
ENSCING00000020273
Uncharacterized protein (89 aa)
     
 
  0.629
ENSCING00000006086
Uncharacterized protein (315 aa)
     
 
  0.629
ENSCING00000023418
Uncharacterized protein (678 aa)
     
 
  0.617
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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