STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6QYE3_CIOINUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1038 aa)    
Predicted Functional Partners:
F6YUL2_CIOIN
Myosin_tail_1 domain-containing protein.
 
  
  0.762
F6PJ88_CIOIN
Myosin_tail_1 domain-containing protein.
 
 
  0.735
H2XQX9_CIOIN
Uncharacterized protein.
 
  
  0.706
swi/snf
Ci-SWI/SNF protein.
    
 0.692
F7BNZ7_CIOIN
Uncharacterized protein.
 
  
  0.671
LOC100182742
Nucleolar RNA helicase 2.
    
  0.637
F6WYF5_CIOIN
Myosin_tail_1 domain-containing protein.
 
  
  0.633
LOC100184552
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.614
LOC494376
Calmodulin-like.
    
 0.614
Cam
Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
    
 0.614
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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