Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC100185844Hydrolase_4 domain-containing protein. (396 aa)    
Predicted Functional Partners:
H2Y2B7_CIOIN
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.598
F6PR16_CIOIN
Uncharacterized protein.
      
 0.511
F6V9X6_CIOIN
Uncharacterized protein.
      
 0.505
F6SKF5_CIOIN
Uncharacterized protein.
      
 0.503
H2Y0F0_CIOIN
Ion_trans domain-containing protein.
      
 0.503
H2Y2W9_CIOIN
Uncharacterized protein.
      
 0.503
F7B1Q5_CIOIN
Leishmanolysin-like peptidase.
   
  
 0.499
F6SP61_CIOIN
Ion_trans domain-containing protein.
      
 0.442
F7API1_CIOIN
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.425
F6XPI8_CIOIN
Abhydrolase_2 domain-containing protein.
     
 0.423
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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