STRINGSTRING
gars protein (Ciona intestinalis) - STRING interaction network
"gars" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garsUncharacterized protein (675 aa)    
Predicted Functional Partners:
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
 
  0.994
iars
Uncharacterized protein (996 aa)
   
 
  0.959
ENSCING00000001343
Uncharacterized protein (1073 aa)
     
  0.943
ENSCING00000009335
Uncharacterized protein (510 aa)
     
   
  0.900
ENSCING00000009130
Uncharacterized protein (772 aa)
   
 
  0.873
Cin.27617
Uncharacterized protein (535 aa)
   
   
  0.872
ENSCING00000004310
Uncharacterized protein (629 aa)
     
 
  0.870
aars
Uncharacterized protein (967 aa)
   
 
  0.853
nars
Uncharacterized protein (559 aa)
   
 
  0.807
ENSCING00000021413
Uncharacterized protein (609 aa)
   
 
  0.781
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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