STRINGSTRING
fer protein (Ciona intestinalis) - STRING interaction network
"fer" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ferUncharacterized protein (838 aa)    
Predicted Functional Partners:
ENSCING00000012576
Uncharacterized protein (666 aa)
       
    0.648
ENSCING00000002916
Uncharacterized protein (607 aa)
       
0.616
Cin.34281
Uncharacterized protein (170 aa)
       
    0.609
plxnb1
Uncharacterized protein (797 aa)
       
    0.609
ENSCING00000009752
Uncharacterized protein (1549 aa)
       
    0.609
ENSCING00000008578
Uncharacterized protein (723 aa)
       
    0.609
dpys
Uncharacterized protein (544 aa)
       
  0.607
ENSCING00000016554
Uncharacterized protein (469 aa)
       
0.606
ENSCING00000007043
Uncharacterized protein (619 aa)
     
 
 
0.601
ENSCING00000022729
Uncharacterized protein (508 aa)
       
0.538
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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