STRINGSTRING
ncbp1 protein (Ciona intestinalis) - STRING interaction network
"ncbp1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncbp1Uncharacterized protein (795 aa)    
Predicted Functional Partners:
ENSCING00000018317
Uncharacterized protein (185 aa)
     
  0.992
ENSCING00000007364
Uncharacterized protein (1190 aa)
     
  0.981
ENSCING00000003319
Zinc finger protein (349 aa)
     
  0.969
ENSCING00000007054
Uncharacterized protein (428 aa)
     
  0.968
ENSCING00000001546
Uncharacterized protein (1185 aa)
     
  0.963
ENSCING00000004199
Uncharacterized protein (225 aa)
     
  0.955
ENSCING00000013568
Uncharacterized protein (260 aa)
     
  0.955
ENSCING00000005189
Uncharacterized protein (689 aa)
     
  0.953
ENSCING00000017376
Uncharacterized protein (252 aa)
     
  0.947
ENSCING00000014720
Uncharacterized protein (610 aa)
     
  0.941
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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