STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6PK54_CIOINUncharacterized protein. (331 aa)    
Predicted Functional Partners:
L7N0T0_CIOIN
RanBD1 domain-containing protein.
   
 0.999
H2XMB6_CIOIN
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
F7ATN8_CIOIN
RanBD1 domain-containing protein.
   
 0.984
LOC100178367
Small ubiquitin-related modifier.
    
 0.956
H2XSL9_CIOIN
Uncharacterized protein.
     
  0.900
rcc1
Regulator of chromosome condensation.
   
 
 0.895
F6ZKW1_CIOIN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.872
H2Y0I3_CIOIN
G_PROTEIN_RECEP_F2_4 domain-containing protein.
   
 0.872
F6PI87_CIOIN
ULP_PROTEASE domain-containing protein.
    
 
 0.857
LOC100180323
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family.
   
 0.825
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (26%) [HD]