STRINGSTRING
smad6/7 protein (Ciona intestinalis) - STRING interaction network
"smad6/7" - Smad6/7 protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smad6/7Smad6/7 protein (361 aa)    
Predicted Functional Partners:
ENSCING00000007996
E3 ubiquitin-protein ligase (752 aa)
       
  0.991
smad2/3b
Smad2/3b protein (426 aa)
       
0.960
smad1/5
Smad1/5 protein (344 aa)
       
0.959
tgfbr-ib
Transforming growth factor beta receptor (531 aa)
     
  0.902
tgfbr-ic
TGFbeta-recepter I homologue precursor (486 aa)
     
  0.888
tgfbr-ia
Transforming growth factor beta receptor precursor (423 aa)
     
  0.888
ENSCING00000014835
E3 ubiquitin-protein ligase (910 aa)
       
  0.830
nedd4l
E3 ubiquitin-protein ligase (871 aa)
       
  0.830
ENSCING00000007623
Uncharacterized protein (4296 aa)
       
  0.828
ENSCING00000018856
Uncharacterized protein (450 aa)
       
  0.809
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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