STRINGSTRING
cbp protein (Ciona intestinalis) - STRING interaction network
"cbp" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbpUncharacterized protein (1533 aa)    
Predicted Functional Partners:
tcf/lef
Transcription factor protein (351 aa)
     
  0.982
kat2a
Uncharacterized protein (709 aa)
     
  0.968
ENSCING00000021869
Uncharacterized protein (286 aa)
     
  0.940
hif
Transcription factor protein (531 aa)
     
  0.940
kat2b
Uncharacterized protein (365 aa)
     
0.940
su(h)
Suppressor of hairless homolog ; Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes (By similarity). Required for the transcriptional expression of Brachyury, suggesting that it participates in notochord differentiation (554 aa)
       
  0.927
ENSCING00000007020
Uncharacterized protein (273 aa)
       
  0.921
CTNNB1
Beta-catenin (497 aa)
       
  0.921
Cin.52569
Histone deacetylase (404 aa)
     
  0.911
ENSCING00000002360
Histone deacetylase (430 aa)
     
  0.893
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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