STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6R7T5_CIOINUncharacterized protein. (1533 aa)    
Predicted Functional Partners:
Foxo
Fork-head domain-containing protein.
   
 0.988
F6PQ66_CIOIN
Uncharacterized protein.
   
 0.975
F6UIG7_CIOIN
CARM1 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.967
H2XYB1_CIOIN
Uncharacterized protein.
    
 
 0.948
nfkbp105
Uncharacterized protein.
    
 0.939
jun
Transcription factor protein.
    
 0.938
foxm
Fork-head domain-containing protein.
    
 0.934
Mitf
BHLH domain-containing protein.
    
 0.931
F6SLD6_CIOIN
Deacetylase sirtuin-type domain-containing protein.
    
 
 0.925
LOC100184693
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.922
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (16%) [HD]