Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6R763_CIOINUncharacterized protein. (611 aa)    
Predicted Functional Partners:
F6V779_CIOIN
Sulfatase domain-containing protein.
     
 0.975
LOC113474074
Sulfatase domain-containing protein.
   
 0.952
H2XSV6_CIOIN
Hyaluronidase.
    
 0.919
LOC100187202
Sulfatase domain-containing protein.
   
 0.917
F7BEW6_CIOIN
Sulfatase domain-containing protein.
   
 0.916
H2XSF5_CIOIN
Sulfatase domain-containing protein.
   
 0.916
F6SKU8_CIOIN
Uncharacterized protein.
      
 0.711
F6UAS2_CIOIN
Sulfatase domain-containing protein.
   
  
 0.661
LOC100184123
Bardet-Biedl syndrome 2 protein homolog.
      
 0.660
LOC100184659
AMPKBI domain-containing protein.
    
 0.545
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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