STRINGSTRING
Cin.1486 protein (Ciona intestinalis) - STRING interaction network
"Cin.1486" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.1486Uncharacterized protein (201 aa)    
Predicted Functional Partners:
Cin.26297
Uncharacterized protein (227 aa)
     
  0.959
ENSCING00000007140
Uncharacterized protein (326 aa)
     
  0.942
ENSCING00000006296
Uncharacterized protein (681 aa)
     
  0.942
ENSCING00000002850
Uncharacterized protein (2241 aa)
     
  0.932
ENSCING00000003945
Uncharacterized protein (308 aa)
   
0.787
impdh2
Inosine-5’-monophosphate dehydrogenase (384 aa)
       
  0.776
ENSCING00000004185
Uncharacterized protein (353 aa)
     
  0.776
ENSCING00000002645
Uncharacterized protein (245 aa)
     
  0.776
ENSCING00000008243
Uncharacterized protein ; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (1009 aa)
     
 
  0.708
ENSCING00000021696
Uncharacterized protein (218 aa)
   
  0.702
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (10%) [HD]