STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6QEI5_CIOINPH domain-containing protein. (304 aa)    
Predicted Functional Partners:
F6TLJ7_CIOIN
Uncharacterized protein.
     
 0.663
LOC113474233
Ankyrin repeat and SAM domain-containing protein 1A-like.
   
 
 0.650
F6YAH3_CIOIN
Uncharacterized protein.
    
 0.626
F6ZQ65_CIOIN
Uncharacterized protein.
   
 0.616
LOC100185283
Ras-related protein O-RAL isoform X2.
    
 0.613
LOC100184804
Uncharacterized protein.
   
 0.610
LOC100184418
Uncharacterized protein.
   
 
 0.570
LOC100176126
Ras-related protein Rab-14.
    
 0.502
F6TLX0_CIOIN
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
  0.501
H2XX02_CIOIN
Ig-like domain-containing protein.
    
  0.501
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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