LOC100185029 protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC100185029

Uncharacterized protein. (245 aa)

Predicted Functional Partners:

LOC100179814

0.999

F7AP11_CIOIN

0.999

H2XU17_CIOIN

0.997

H2XQ34_CIOIN

0.976

LOC100177611

0.972

LOC100181871

0.965

ENSCINP00000009254

0.963

H2XYV9_CIOIN

0.963

LOC100181776

0.963

LOC100186257

0.962

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCINP00000009254	F7AP11_CIOIN	ENSCINP00000009254	ENSCINP00000015282	Uncharacterized protein.	Uncharacterized protein.	0.964
ENSCINP00000009254	H2XQ34_CIOIN	ENSCINP00000009254	ENSCINP00000031768	Uncharacterized protein.	Uncharacterized protein.	0.672
ENSCINP00000009254	H2XU17_CIOIN	ENSCINP00000009254	ENSCINP00000033151	Uncharacterized protein.	Longin domain-containing protein.	0.834
ENSCINP00000009254	H2XYV9_CIOIN	ENSCINP00000009254	ENSCINP00000034843	Uncharacterized protein.	Uncharacterized protein.	0.933
ENSCINP00000009254	LOC100179814	ENSCINP00000009254	ENSCINP00000009317	Uncharacterized protein.	Syntaxin-18.	0.978
ENSCINP00000009254	LOC100185029	ENSCINP00000009254	ENSCINP00000018445	Uncharacterized protein.	Uncharacterized protein.	0.963
ENSCINP00000009254	LOC100186257	ENSCINP00000009254	ENSCINP00000008602	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.936
F7AP11_CIOIN	ENSCINP00000009254	ENSCINP00000015282	ENSCINP00000009254	Uncharacterized protein.	Uncharacterized protein.	0.964
F7AP11_CIOIN	H2XQ34_CIOIN	ENSCINP00000015282	ENSCINP00000031768	Uncharacterized protein.	Uncharacterized protein.	0.997
F7AP11_CIOIN	H2XU17_CIOIN	ENSCINP00000015282	ENSCINP00000033151	Uncharacterized protein.	Longin domain-containing protein.	0.997
F7AP11_CIOIN	H2XYV9_CIOIN	ENSCINP00000015282	ENSCINP00000034843	Uncharacterized protein.	Uncharacterized protein.	0.964
F7AP11_CIOIN	LOC100177611	ENSCINP00000015282	ENSCINP00000033000	Uncharacterized protein.	Vesicle-associated membrane protein 4-like.	0.992
F7AP11_CIOIN	LOC100179814	ENSCINP00000015282	ENSCINP00000009317	Uncharacterized protein.	Syntaxin-18.	0.999
F7AP11_CIOIN	LOC100181776	ENSCINP00000015282	ENSCINP00000036386	Uncharacterized protein.	BET1 homolog.	0.995
F7AP11_CIOIN	LOC100181871	ENSCINP00000015282	ENSCINP00000005346	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.996
F7AP11_CIOIN	LOC100185029	ENSCINP00000015282	ENSCINP00000018445	Uncharacterized protein.	Uncharacterized protein.	0.999
F7AP11_CIOIN	LOC100186257	ENSCINP00000015282	ENSCINP00000008602	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.955
H2XQ34_CIOIN	ENSCINP00000009254	ENSCINP00000031768	ENSCINP00000009254	Uncharacterized protein.	Uncharacterized protein.	0.672
H2XQ34_CIOIN	F7AP11_CIOIN	ENSCINP00000031768	ENSCINP00000015282	Uncharacterized protein.	Uncharacterized protein.	0.997
H2XQ34_CIOIN	H2XU17_CIOIN	ENSCINP00000031768	ENSCINP00000033151	Uncharacterized protein.	Longin domain-containing protein.	0.979