STRINGSTRING
ENSCING00000009117 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009117" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009117Uncharacterized protein (1237 aa)    
Predicted Functional Partners:
ENSCING00000021117
Uncharacterized protein (224 aa)
       
  0.986
Cin.52569
Histone deacetylase (404 aa)
     
  0.983
ENSCING00000002360
Histone deacetylase (430 aa)
     
  0.983
ENSCING00000019847
Zinc finger protein LOC723799 (1298 aa)
     
  0.978
Cin.11699
Uncharacterized protein (172 aa)
       
  0.977
ENSCING00000020313
Uncharacterized protein (344 aa)
       
  0.977
ENSCING00000015298
Uncharacterized protein (362 aa)
     
  0.972
Cin.25686
Uncharacterized protein (373 aa)
     
  0.955
rbbp4
Uncharacterized protein (431 aa)
     
  0.954
LOC778671
Uncharacterized protein LOC778671 (319 aa)
       
  0.952
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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