STRINGSTRING
ENSCING00000009221 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009221" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009221Uncharacterized protein (572 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.992
smarcc2
Uncharacterized protein (639 aa)
     
  0.989
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.988
nfyb
Transcription factor protein (184 aa)
     
  0.982
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.982
ENSCING00000022359
Histone H3 (136 aa)
       
  0.981
ENSCING00000013118
Uncharacterized protein (147 aa)
       
  0.981
ENSCING00000002753
Histone H3 (136 aa)
       
  0.981
ENSCING00000011871
Uncharacterized protein (210 aa)
     
  0.975
Cin.26664
Uncharacterized protein (316 aa)
     
  0.975
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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