STRINGSTRING
ENSCING00000009249 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009249" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009249Uncharacterized protein (400 aa)    
Predicted Functional Partners:
ENSCING00000004181
Uncharacterized protein (474 aa)
     
 
  0.472
dpyd
Uncharacterized protein (1024 aa)
     
   
  0.468
ENSCING00000023656
Uncharacterized protein (520 aa)
           
  0.435
ENSCING00000003390
Uncharacterized protein (369 aa)
           
  0.432
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
           
  0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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