Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186570Rhodanese domain-containing protein. (363 aa)    
Predicted Functional Partners:
F6SSA8_CIOIN
AB hydrolase-1 domain-containing protein.
      
 0.809
F7AQD6_CIOIN
Uncharacterized protein.
     
 0.743
F6YP95_CIOIN
Guanylate kinase-like domain-containing protein.
      
 0.743
F6X1K6_CIOIN
Uncharacterized protein.
      
 0.673
pdedelta
Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family.
      
 0.643
H2XRS9_CIOIN
Uncharacterized protein.
      
 0.584
LOC100179962
Protein FRG1.
      
 0.573
F6YJE0_CIOIN
Uncharacterized protein.
      
 0.572
F6Y1T4_CIOIN
Uncharacterized protein.
      
 0.569
F6VLQ0_CIOIN
Uncharacterized protein.
      
 0.566
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (12%) [HD]