STRINGSTRING
Cin.30938 protein (Ciona intestinalis) - STRING interaction network
"Cin.30938" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.30938Uncharacterized protein (250 aa)    
Predicted Functional Partners:
ENSCING00000006501
Uncharacterized protein (778 aa)
       
    0.668
ENSCING00000001685
Uncharacterized protein (162 aa)
       
    0.668
betaTrCP
Beta-transducin repeat-containing homologue protein (621 aa)
         
  0.640
ENSCING00000004251
Uncharacterized protein (583 aa)
     
 
  0.618
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
         
    0.613
ENSCING00000007977
Uncharacterized protein (140 aa)
         
  0.611
meta3
Ci-META3 (319 aa)
     
 
    0.607
ENSCING00000008398
Uncharacterized protein (395 aa)
     
 
    0.607
ENSCING00000012987
Uncharacterized protein (313 aa)
         
  0.606
ENSCING00000006677
Uncharacterized protein (377 aa)
         
  0.595
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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