STRINGSTRING
ENSCING00000009308 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009308" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009308Uncharacterized protein (627 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.885
ENSCING00000003432
Uncharacterized protein (1219 aa)
     
  0.847
smarcc2
Uncharacterized protein (639 aa)
     
  0.787
ENSCING00000019359
Uncharacterized protein (141 aa)
     
  0.751
Cin.30927
Uncharacterized protein (259 aa)
   
  0.738
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.699
ENSCING00000018708
Uncharacterized protein (1528 aa)
   
  0.693
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.677
ENSCING00000019533
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (225 aa)
     
  0.674
ENSCING00000025128
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (207 aa)
     
  0.674
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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