STRINGSTRING
jnk protein (Ciona intestinalis) - STRING interaction network
"jnk" - C-jun N-terminal kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jnkC-jun N-terminal kinase (437 aa)    
Predicted Functional Partners:
jun
Transcription factor protein (381 aa)
       
  0.964
mapkk7
Mitogen-activated protein kinase kinase (478 aa)
   
 
0.958
LOC445702
Rac1 protein (192 aa)
     
  0.952
rac2
Rac2 protein (192 aa)
     
  0.902
LOC448958
Rac5 protein (193 aa)
     
  0.902
LOC448957
Rac4 protein (193 aa)
     
  0.902
ENSCING00000007986
Dual specificity phosphatase (434 aa)
     
  0.886
ENSCING00000021385
Uncharacterized protein (276 aa)
     
  0.882
foxo
Uncharacterized protein (213 aa)
         
  0.874
Tak1
Mitogen-activated protein kinase kinase kinase (190 aa)
   
 
  0.853
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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