STRINGSTRING
Cin.23890 protein (Ciona intestinalis) - STRING interaction network
"Cin.23890" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.23890Uncharacterized protein (483 aa)    
Predicted Functional Partners:
ENSCING00000002066
Uncharacterized protein (502 aa)
   
  0.987
ENSCING00000008796
Uncharacterized protein (345 aa)
   
  0.897
ENSCING00000020754
Malate dehydrogenase (334 aa)
   
  0.893
ENSCING00000002057
Uncharacterized protein (501 aa)
   
  0.878
ENSCING00000021189
Uncharacterized protein (264 aa)
     
 
  0.872
ENSCING00000006084
Uncharacterized protein (725 aa)
   
  0.848
ENSCING00000002987
Uncharacterized protein (731 aa)
   
  0.848
ENSCING00000007286
Uncharacterized protein (370 aa)
 
  0.846
ENSCING00000008658
Isocitrate dehydrogenase [NADP] (422 aa)
   
 
  0.844
ENSCING00000018343
Isocitrate dehydrogenase [NADP] (414 aa)
   
 
  0.844
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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