STRINGSTRING
ENSCING00000009426 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009426" - Pseudouridine synthase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009426Pseudouridine synthase (371 aa)    
Predicted Functional Partners:
ENSCING00000004599
Uncharacterized protein (528 aa)
   
  0.790
ENSCING00000003563
Uncharacterized protein (345 aa)
   
 
  0.684
gmps
Uncharacterized protein (688 aa)
   
   
  0.671
ENSCING00000003598
Uncharacterized protein (901 aa)
       
      0.658
ENSCING00000001646
Uncharacterized protein (436 aa)
     
        0.655
ENSCING00000023201
Uncharacterized protein (142 aa)
   
   
  0.654
ENSCING00000021599
Uncharacterized protein (117 aa)
     
 
  0.638
ENSCING00000009202
Uncharacterized protein (489 aa)
   
   
  0.635
ENSCING00000008194
Uncharacterized protein (596 aa)
     
   
  0.633
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
   
  0.631
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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