STRINGSTRING
uap1 protein (Ciona intestinalis) - STRING interaction network
"uap1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uap1Uncharacterized protein (514 aa)    
Predicted Functional Partners:
ENSCING00000003230
Uncharacterized protein (550 aa)
   
  0.971
ENSCING00000007654
Uncharacterized protein (488 aa)
       
 
  0.933
ENSCING00000013439
Uncharacterized protein (487 aa)
     
      0.930
gfpt1
Uncharacterized protein (689 aa)
     
 
  0.636
ENSCING00000023536
Uncharacterized protein (851 aa)
              0.626
ENSCING00000021762
Uncharacterized protein (826 aa)
              0.626
ENSCING00000016647
Galactose-1-phosphate uridylyltransferase (339 aa)
     
  0.547
ENSCING00000009446
Glucose-6-phosphate isomerase (232 aa)
     
   
  0.543
ENSCING00000011719
Uncharacterized protein (491 aa)
       
 
  0.512
ENSCING00000008401
Uncharacterized protein (445 aa)
       
 
  0.512
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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