STRINGSTRING
oplah protein (Ciona intestinalis) - STRING interaction network
"oplah" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oplahUncharacterized protein (1214 aa)    
Predicted Functional Partners:
ENSCING00000003707
Uncharacterized protein (637 aa)
       
    0.960
ENSCING00000017909
Uncharacterized protein (244 aa)
   
 
  0.947
ENSCING00000001911
Uncharacterized protein (614 aa)
   
 
  0.947
ENSCING00000000540
Uncharacterized protein (560 aa)
   
 
  0.947
ENSCING00000014616
Uncharacterized protein (299 aa)
       
    0.927
ENSCING00000005776
Glutamine synthetase (334 aa)
         
  0.810
ENSCING00000002658
Uncharacterized protein (555 aa)
     
 
  0.808
ENSCING00000009647
Glutamate dehydrogenase (443 aa)
       
    0.800
ENSCING00000007260
Glutamate dehydrogenase (505 aa)
       
    0.800
gad
Glutamate decarboxylase 1 (531 aa)
     
 
    0.800
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]