STRINGSTRING
ENSCING00000009513 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009513" - Lysyl-tRNA synthetase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009513Lysyl-tRNA synthetase (576 aa)    
Predicted Functional Partners:
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
  0.997
ENSCING00000012827
Uncharacterized protein (287 aa)
   
 
  0.918
ENSCING00000009130
Uncharacterized protein (772 aa)
   
  0.902
gmps
Uncharacterized protein (688 aa)
   
   
  0.899
ENSCING00000007294
Uncharacterized protein (673 aa)
   
  0.897
iars
Uncharacterized protein (996 aa)
   
  0.893
lars
Uncharacterized protein (1180 aa)
   
  0.888
Cin.27617
Uncharacterized protein (535 aa)
   
  0.882
mars
Uncharacterized protein (664 aa)
   
  0.873
ENSCING00000021899
Uncharacterized protein (297 aa)
   
  0.822
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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