STRINGSTRING
e12/e47 protein (Ciona intestinalis) - STRING interaction network
"e12/e47" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
e12/e47Transcription factor protein (641 aa)    
Predicted Functional Partners:
atonal
Uncharacterized protein (96 aa)
       
 
  0.973
LOC778534
Transcription factor protein (298 aa)
       
 
  0.962
myod
MyoD-family protein j (590 aa)
       
  0.929
ptfa
Uncharacterized protein (66 aa)
       
 
  0.846
notrlc
Transcription factor protein (297 aa)
       
 
  0.813
LOC778542
Transcription factor protein (378 aa)
       
 
  0.789
ENSCING00000000045
Transcription factor protein (191 aa)
       
 
  0.785
figa-like
Uncharacterized protein (333 aa)
       
 
  0.784
hand
Transcription factor protein (378 aa)
       
 
  0.784
ENSCING00000007020
Uncharacterized protein (273 aa)
     
  0.702
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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