STRINGSTRING
if5-1 protein (Ciona intestinalis) - STRING interaction network
"if5-1" - Translation initiation factor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
if5-1Translation initiation factor (267 aa)    
Predicted Functional Partners:
eif2s3
Uncharacterized protein (473 aa)
     
  0.998
ENSCING00000006234
Uncharacterized protein (305 aa)
     
  0.995
ENSCING00000000067
Uncharacterized protein (563 aa)
     
  0.994
ENSCING00000014451
Uncharacterized protein (482 aa)
     
  0.994
ENSCING00000014647
Uncharacterized protein (453 aa)
     
  0.994
ENSCING00000004197
Uncharacterized protein (356 aa)
     
  0.993
ENSCING00000018191
Eukaryotic translation initiation factor 3 subunit G ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (272 aa)
     
  0.990
ENSCING00000004820
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (1051 aa)
     
  0.988
ENSCING00000003620
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (700 aa)
     
  0.987
ENSCING00000003743
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (326 aa)
     
  0.987
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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