STRINGSTRING
ENSCING00000009563 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009563" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009563Uncharacterized protein (292 aa)    
Predicted Functional Partners:
ENSCING00000022589
Uncharacterized protein (350 aa)
 
     
    0.718
ash2-like
Ash2-like protein (352 aa)
       
  0.682
ENSCING00000010029
Histone H2A (141 aa)
       
  0.671
ENSCING00000014428
Uncharacterized protein (519 aa)
     
  0.670
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
      0.637
ENSCING00000017216
Uncharacterized protein (400 aa)
     
  0.617
ENSCING00000001613
Uncharacterized protein (477 aa)
     
  0.617
whsc1
Uncharacterized protein (543 aa)
     
  0.615
ENSCING00000000272
Uncharacterized protein (2337 aa)
         
    0.613
ENSCING00000004516
Zinc finger protein ZF(C2H2)-102 ; Single-stranded DNA-dependent ATP-dependent helicase (706 aa)
     
 
    0.598
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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