STRINGSTRING
unc4-a protein (Ciona intestinalis) - STRING interaction network
"unc4-a" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc4-aUncharacterized protein (228 aa)    
Predicted Functional Partners:
ENSCING00000014405
Uncharacterized protein (346 aa)
       
 
  0.770
LOC778715
Transcription factor protein (1039 aa)
     
  0.759
srf
Transcription factor protein (335 aa)
       
  0.699
groucho2
Groucho (835 aa)
       
 
  0.597
groucho1
Groucho (847 aa)
       
 
  0.597
lhx3
LIM/homeobox protein Lhx3a type 1 (596 aa)
       
 
0.593
foxq
Transcription factor protein (385 aa)
       
  0.559
foxo
Uncharacterized protein (213 aa)
       
  0.559
foxd-a/b
Transcription factor protein (610 aa)
       
  0.559
ENSCING00000018677
Uncharacterized protein (119 aa)
       
  0.559
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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