Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186863PDZ domain-containing protein GIPC1. (316 aa)    
Predicted Functional Partners:
LOC100176004
PH domain-containing protein.
   
 
 0.932
F7A1B7_CIOIN
Uncharacterized protein.
   
 
 0.932
F6UY41_CIOIN
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.838
F6UYB4_CIOIN
Myosin-VI_CBD domain-containing protein.
    
 
 0.819
Tgfbeta2
TGF_BETA_2 domain-containing protein.
     
  0.767
H2XPZ1_CIOIN
Uncharacterized protein.
      
 0.687
Nr1
Uncharacterized protein.
      
 0.680
LOC100179144
SUN domain-containing ossification factor-like isoform X1.
      
 0.643
LOC100184864
BTB domain-containing protein.
      
 0.641
LOC101243181
Uncharacterized protein.
    
 
 0.568
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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