STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100184245Lactadherin. (297 aa)    
Predicted Functional Partners:
H2XXY9_CIOIN
Uncharacterized protein.
     
 0.675
F7ABV6_CIOIN
Uncharacterized protein; Belongs to the multicopper oxidase family.
 
 
    0.649
LOC100181744
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
     
 0.599
F6U7R9_CIOIN
Uncharacterized protein.
  
 
 0.580
F6VXA3_CIOIN
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.576
LOC104266675
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.563
LOC100176818
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.536
LOC100179496
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.528
H2XP77_CIOIN
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.518
LOC100181329
Protein TFG.
   
  0.502
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.