LOC100182979 protein (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC100182979

Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily. (420 aa)

Predicted Functional Partners:

H2XNX0_CIOIN

0.923

F6US09_CIOIN

0.905

F6R9A6_CIOIN

0.889

H2XYM2_CIOIN

0.832

LOC100178818

0.816

LOC100184552

0.512

LOC494376

0.512

Cam

0.512

F6T2A6_CIOIN

0.512

LOC100185594

0.454

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cam	F6R9A6_CIOIN	ENSCINP00000017572	ENSCINP00000009967	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Uncharacterized protein.	0.643
Cam	F6US09_CIOIN	ENSCINP00000017572	ENSCINP00000009229	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.449
Cam	H2XNX0_CIOIN	ENSCINP00000017572	ENSCINP00000031353	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.487
Cam	LOC100182979	ENSCINP00000017572	ENSCINP00000019808	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.	0.512
F6R9A6_CIOIN	Cam	ENSCINP00000009967	ENSCINP00000017572	Uncharacterized protein.	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	0.643
F6R9A6_CIOIN	F6T2A6_CIOIN	ENSCINP00000009967	ENSCINP00000017574	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.643
F6R9A6_CIOIN	LOC100182979	ENSCINP00000009967	ENSCINP00000019808	Uncharacterized protein.	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.	0.889
F6R9A6_CIOIN	LOC100184552	ENSCINP00000009967	ENSCINP00000001155	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.643
F6R9A6_CIOIN	LOC100185594	ENSCINP00000009967	ENSCINP00000006322	Uncharacterized protein.	Spermatogenesis-associated protein 21-like.	0.643
F6R9A6_CIOIN	LOC494376	ENSCINP00000009967	ENSCINP00000015262	Uncharacterized protein.	Calmodulin-like.	0.643
F6T2A6_CIOIN	F6R9A6_CIOIN	ENSCINP00000017574	ENSCINP00000009967	Uncharacterized protein; Belongs to the calmodulin family.	Uncharacterized protein.	0.643
F6T2A6_CIOIN	F6US09_CIOIN	ENSCINP00000017574	ENSCINP00000009229	Uncharacterized protein; Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.449
F6T2A6_CIOIN	H2XNX0_CIOIN	ENSCINP00000017574	ENSCINP00000031353	Uncharacterized protein; Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.487
F6T2A6_CIOIN	LOC100182979	ENSCINP00000017574	ENSCINP00000019808	Uncharacterized protein; Belongs to the calmodulin family.	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.	0.512
F6US09_CIOIN	Cam	ENSCINP00000009229	ENSCINP00000017572	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	0.449
F6US09_CIOIN	F6T2A6_CIOIN	ENSCINP00000009229	ENSCINP00000017574	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Uncharacterized protein; Belongs to the calmodulin family.	0.449
F6US09_CIOIN	H2XNX0_CIOIN	ENSCINP00000009229	ENSCINP00000031353	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.870
F6US09_CIOIN	H2XYM2_CIOIN	ENSCINP00000009229	ENSCINP00000034756	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.566
F6US09_CIOIN	LOC100178818	ENSCINP00000009229	ENSCINP00000016940	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.540
F6US09_CIOIN	LOC100182979	ENSCINP00000009229	ENSCINP00000019808	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.	0.905

page 1 of 3

Server load: medium (42%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About