STRINGSTRING
psl3 protein (Ciona intestinalis) - STRING interaction network
"psl3" - Presenilin-like protein 3 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psl3Presenilin-like protein 3 (372 aa)    
Predicted Functional Partners:
ENSCING00000017966
Uncharacterized protein (187 aa)
     
        0.740
ENSCING00000009327
Uncharacterized protein (454 aa)
     
        0.659
ENSCING00000003014
Uncharacterized protein (185 aa)
     
        0.632
ENSCING00000007292
Uncharacterized protein (722 aa)
     
        0.531
ENSCING00000013137
Uncharacterized protein (285 aa)
     
  0.520
tram1/2
Translocating chain-associating membrane protein 1/2 (375 aa)
     
      0.473
ENSCING00000002845
Uncharacterized protein (238 aa)
     
   
  0.460
ENSCING00000018603
Uncharacterized protein (568 aa)
     
   
  0.422
ENSCING00000004519
Uncharacterized protein ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (254 aa)
     
  0.412
ENSCING00000015969
Uncharacterized protein ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (267 aa)
     
  0.412
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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