STRINGSTRING
ttc8 protein (Ciona intestinalis) - STRING interaction network
"ttc8" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc8Uncharacterized protein (502 aa)    
Predicted Functional Partners:
ENSCING00000006064
Uncharacterized protein (582 aa)
     
  0.841
ENSCING00000006438
Uncharacterized protein (708 aa)
     
  0.840
bbs7
Uncharacterized protein (728 aa)
     
  0.831
ENSCING00000025184
Uncharacterized protein (441 aa)
     
  0.822
ENSCING00000004657
Uncharacterized protein (185 aa)
     
  0.811
ENSCING00000015355
Uncharacterized protein (184 aa)
     
  0.811
ENSCING00000002875
Uncharacterized protein (345 aa)
     
  0.803
ift140
Uncharacterized protein (1490 aa)
     
   
  0.736
ENSCING00000009382
Uncharacterized protein (446 aa)
     
0.707
ift52
Uncharacterized protein (426 aa)
     
   
  0.698
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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