STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100182017G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (397 aa)    
Predicted Functional Partners:
LOC100182745
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
 0.609
LOC100185742
Guanine nucleotide-binding protein subunit beta-5.
    
 0.609
LOC100185405
Guanine nucleotide-binding protein G(S) subunit alpha-like.
    
 0.554
LOC104266020
Uncharacterized protein.
    
 0.554
F6RD62_CIOIN
Uncharacterized protein.
    
 0.455
H2XQR3_CIOIN
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.431
H2XNI5_CIOIN
Ig-like domain-containing protein.
  
 
  0.418
H2XMD3_CIOIN
Homeobox domain-containing protein.
  
 
   0.412
F6R1I0_CIOIN
Uncharacterized protein.
    
 0.406
LOC445772
Guanine nucleotide-binding protein G(Q) subunit alpha isoform X1.
    
 0.406
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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