STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100185683Gastrula zinc finger protein XlCGF71.1-like. (228 aa)    
Predicted Functional Partners:
zf(c2h2)-78
Zinc finger protein ZF(C2H2)-78 isoform X1.
  
     0.504
zf(c2h2)-132
Zinc finger protein ZF(C2H2)-132.
  
     0.478
zf(c2h2)-23
Uncharacterized protein.
  
     0.476
zf(c2h2)-24
Uncharacterized protein.
  
     0.460
Klf2
Uncharacterized protein.
  
     0.456
Zf(btb/poz)
Uncharacterized protein.
  
     0.435
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.