STRINGSTRING
ENSCING00000009891 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009891" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009891Uncharacterized protein (147 aa)    
Predicted Functional Partners:
ENSCING00000012827
Uncharacterized protein (287 aa)
   
   
  0.894
Cin.27617
Uncharacterized protein (535 aa)
   
   
  0.806
gcn1l1
Uncharacterized protein (2637 aa)
     
 
  0.802
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
   
  0.761
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.759
if5-1
Translation initiation factor (267 aa)
     
  0.691
ENSCING00000023790
Uncharacterized protein (1081 aa)
   
   
  0.657
gmps
Uncharacterized protein (688 aa)
   
   
  0.654
ENSCING00000006234
Uncharacterized protein (305 aa)
     
 
  0.643
ENSCING00000009513
Lysyl-tRNA synthetase (576 aa)
     
 
  0.640
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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