STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100176045Serine/threonine-protein kinase NIM1 isoform X1. (508 aa)    
Predicted Functional Partners:
H2XT58_CIOIN
KA1 domain-containing protein.
 
  
 0.900
LOC100184659
AMPKBI domain-containing protein.
    
 0.592
F6UCD8_CIOIN
Uncharacterized protein.
   
 0.498
F7BH38_CIOIN
Uncharacterized protein.
   
 0.498
H2XZ11_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.472
F6VXC2_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.461
F6S4F7_CIOIN
Non-specific serine/threonine protein kinase.
  
0.426
F6UX64_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.421
F6XKQ1_CIOIN
PHB domain-containing protein.
 
    
 0.418
LOC100176030
WD_REPEATS_REGION domain-containing protein.
    
 0.414
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.