STRINGSTRING
ephrinb protein (Ciona intestinalis) - STRING interaction network
"ephrinb" - Ephrin precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ephrinbEphrin precursor (359 aa)    
Predicted Functional Partners:
ephe
Ephrin receptor epsilon precursor (1006 aa)
     
  0.966
ephg
Uncharacterized protein (988 aa)
     
  0.961
ephd
Ephrin receptor delta (1048 aa)
     
  0.961
eph3
Ephrin receptor precursor (1002 aa)
     
  0.957
ENSCING00000011899
Uncharacterized protein (992 aa)
     
  0.940
eph-like
Ephrin receptor like protein precursor (1085 aa)
     
  0.940
ENSCING00000007374
Uncharacterized protein (299 aa)
       
  0.747
ENSCING00000016554
Uncharacterized protein (469 aa)
     
  0.680
atp13a3
Uncharacterized protein (1125 aa)
     
        0.670
ENSCING00000022729
Uncharacterized protein (508 aa)
     
  0.669
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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