STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7BB99_CIOINMUTSd domain-containing protein. (247 aa)    
Predicted Functional Partners:
H2XV86_CIOIN
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
      0.899
F6YKR1_CIOIN
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 0.879
LOC100182748
DNA_mis_repair domain-containing protein.
  
 0.758
LOC100184693
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.757
LOC100180400
Uncharacterized protein.
  
 0.715
F6ZUK0_CIOIN
DNA_mis_repair domain-containing protein.
  
 0.715
F7B169_CIOIN
MutL_C domain-containing protein.
  
 0.715
F7B162_CIOIN
Uncharacterized protein.
  
 0.715
F6QXW9_CIOIN
Helicase ATP-binding domain-containing protein.
    
 
 0.697
F6UAB2_CIOIN
FANCM-MHF_bd domain-containing protein.
    
 
 0.697
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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