STRINGSTRING
Cin.53425 protein (Ciona intestinalis) - STRING interaction network
"Cin.53425" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.53425Uncharacterized protein (247 aa)    
Predicted Functional Partners:
ENSCING00000013516
Uncharacterized protein (208 aa)
   
  0.941
ENSCING00000013515
Uncharacterized protein (252 aa)
   
  0.941
ENSCING00000002563
Uncharacterized protein (751 aa)
   
  0.941
ENSCING00000002674
Uncharacterized protein (817 aa)
   
  0.929
ENSCING00000003685
Uncharacterized protein (330 aa)
   
  0.926
ENSCING00000002572
Uncharacterized protein (731 aa)
     
 
  0.853
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.836
dpyd
Uncharacterized protein (1024 aa)
         
  0.818
ENSCING00000001547
Uncharacterized protein (788 aa)
     
  0.803
ENSCING00000023482
Uncharacterized protein (607 aa)
     
  0.783
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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