STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XJ73_CIOINUncharacterized protein. (143 aa)    
Predicted Functional Partners:
F7AMF6_CIOIN
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
  0.540
Vachtp
MFS domain-containing protein.
     
  0.540
F7A6N9_CIOIN
Uncharacterized protein.
     
  0.540
LOC100182553
AP-2 complex subunit mu isoform X3; Belongs to the adaptor complexes medium subunit family.
     
  0.540
F6UP73_CIOIN
ENTH domain-containing protein.
     
  0.540
LOC100176522
AP-1 complex subunit gamma.
     
  0.540
F7BA39_CIOIN
Uncharacterized protein.
     
  0.540
F7ABF6_CIOIN
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
     
  0.540
F6Z0L2_CIOIN
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
  0.540
F6RPM3_CIOIN
Clathrin_bdg domain-containing protein.
     
  0.540
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.