STRINGSTRING
ENSCING00000012588 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000012588" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000012588Uncharacterized protein (588 aa)    
Predicted Functional Partners:
ENSCING00000008812
Uncharacterized protein (228 aa)
     
  0.976
ENSCING00000003329
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1141 aa)
     
  0.928
ENSCING00000025128
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (207 aa)
     
  0.854
ENSCING00000007684
Uncharacterized protein (749 aa)
     
  0.854
ENSCING00000019533
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (225 aa)
     
  0.830
ENSCING00000005472
Uncharacterized protein (363 aa)
     
  0.789
ubf
Transcription factor protein (789 aa)
     
  0.744
ENSCING00000019359
Uncharacterized protein (141 aa)
         
  0.720
Cin.26664
Uncharacterized protein (316 aa)
     
  0.707
ENSCING00000003563
Uncharacterized protein (345 aa)
     
 
  0.647
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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