STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100185896Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (164 aa)    
Predicted Functional Partners:
F6UJ17_CIOIN
Uncharacterized protein.
     
 0.539
H2XJS9_CIOIN
Protein kinase domain-containing protein.
     
 0.539
H2Y2H0_CIOIN
Protein kinase domain-containing protein.
     
 0.539
LOC100175623
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
  
     0.465
per-like
Peroxiredoxin-like.
  
  
 0.443
F6QQZ3_CIOIN
Thioredoxin domain-containing protein.
  
  
 0.443
LOC100177610
Peroxiredoxin-6-like isoform X1.
  
  
 0.443
H2XQS5_CIOIN
Thioredoxin domain-containing protein.
  
  
 0.443
LOC100175802
Peroxiredoxin-like.
  
  
 0.443
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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