STRINGSTRING
dbx protein (Ciona intestinalis) - STRING interaction network
"dbx" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dbxUncharacterized protein (197 aa)    
Predicted Functional Partners:
lhx1
Uncharacterized protein (387 aa)
     
 
  0.488
lhx2/9
Uncharacterized protein (171 aa)
       
 
  0.485
hoxa2
Gsx (349 aa)
     
   
  0.467
lmx-like
Transcription factor protein (505 aa)
     
 
  0.465
lmx
Transcription factor protein (625 aa)
     
 
  0.465
isl
LIM homeodomain protein (402 aa)
       
 
  0.463
dmbx
Dmbx protein (240 aa)
     
 
  0.453
otp
Transcription factor protein (492 aa)
     
 
  0.453
frem1
Uncharacterized protein (2177 aa)
       
 
  0.452
unc4-b
Uncharacterized protein (165 aa)
       
 
  0.449
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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