STRINGSTRING
aristaless protein (Ciona intestinalis) - STRING interaction network
"aristaless" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aristalessTranscription factor protein (429 aa)    
Predicted Functional Partners:
ENSCING00000014405
Uncharacterized protein (346 aa)
       
 
  0.770
LOC778715
Transcription factor protein (1039 aa)
     
  0.759
srf
Transcription factor protein (335 aa)
       
  0.699
foxk
Transcription factor protein (614 aa)
       
  0.680
foxn2/3
Transcription factor protein (748 aa)
       
  0.668
foxL
FoxL protein (387 aa)
       
  0.666
foxm
Transcription factor protein (916 aa)
       
  0.665
foxj2
Transcription factor protein (560 aa)
       
  0.665
foxo
Uncharacterized protein (213 aa)
       
  0.665
foxf
Transcription factor protein (575 aa)
       
  0.664
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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