STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6V7B2_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (214 aa)    
Predicted Functional Partners:
H2XNI5_CIOIN
Ig-like domain-containing protein.
    
 0.883
F7AB73_CIOIN
Uncharacterized protein.
    
 0.851
LOC100184384
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.796
F6UJ17_CIOIN
Uncharacterized protein.
    
 0.790
H2XJS9_CIOIN
Protein kinase domain-containing protein.
    
 0.790
H2Y2H0_CIOIN
Protein kinase domain-containing protein.
    
 0.790
F6XVF3_CIOIN
Serine/threonine-protein phosphatase.
   
 0.772
F6YP95_CIOIN
Guanylate kinase-like domain-containing protein.
    
 0.742
F6W2N4_CIOIN
Uncharacterized protein.
    
 0.729
F6R9A6_CIOIN
Uncharacterized protein.
    
 0.729
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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