STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10017745860S ribosomal protein L37a. (90 aa)    
Predicted Functional Partners:
F6R0P0_CIOIN
Ribosomal_S10 domain-containing protein.
   
 
 0.999
LOC100181712
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.999
F6YMZ5_CIOIN
Uncharacterized protein.
   
 
 0.999
LOC100183019
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
F6TJY9_CIOIN
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.999
LOC100175749
60S ribosomal protein L26.
   
 0.999
F6WJQ0_CIOIN
Ribosomal_L16 domain-containing protein.
   
 0.999
F6XBT4_CIOIN
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.999
LOC100185384
ubiquitin-60S ribosomal protein L40.
   
 
 0.999
LOC100176033
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.