STRINGSTRING
ppar protein (Ciona intestinalis) - STRING interaction network
"ppar" - Nuclear receptor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pparNuclear receptor (644 aa)    
Predicted Functional Partners:
Cin.25686
Uncharacterized protein (373 aa)
       
  0.897
ENSCING00000018708
Uncharacterized protein (1528 aa)
       
  0.651
ENSCING00000021447
Uncharacterized protein (160 aa)
       
  0.635
ENSCING00000018867
Uncharacterized protein (227 aa)
       
  0.635
ENSCING00000009221
Uncharacterized protein (572 aa)
       
  0.634
dld
Dihydrolipoyl dehydrogenase (509 aa)
       
    0.614
ENSCING00000003214
Uncharacterized protein (357 aa)
         
  0.612
ENSCING00000008885
Uncharacterized protein (538 aa)
       
    0.607
ENSCING00000009059
Uncharacterized protein ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (508 aa)
         
  0.596
ENSCING00000001641
Uncharacterized protein (476 aa)
         
  0.596
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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