STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6YDS2_CIOINHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (434 aa)    
Predicted Functional Partners:
LOC100186713
Chromobox protein homolog 1-like.
   
 0.945
F6YFY0_CIOIN
Tr-type G domain-containing protein.
 
  
   0.904
F6SLD6_CIOIN
Deacetylase sirtuin-type domain-containing protein.
    
 0.856
F7AHT0_CIOIN
Histone H3; Belongs to the histone H3 family.
   
 0.832
LOC100177125
Histone H3.3-like.
   
 0.832
LOC100186757
Histone H3; Belongs to the histone H3 family.
   
 0.832
F7ANR5_CIOIN
CPSF_A domain-containing protein.
    
 
 0.793
F6S8F6_CIOIN
Chromo domain-containing protein.
    
 0.772
H2XVL0_CIOIN
Uncharacterized protein.
    
 0.772
F6WNH2_CIOIN
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.755
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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